BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009F09SP1|AL426077
(682 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1713 1170 0.0
>3x_Contig1713
Length = 18539
Score = 1170 bits (569), Expect = 0.0
Identities = 637/683 (93%), Gaps = 1/683 (0%)
Strand = Plus / Minus
Query: 1 caatgcagtaakacacgtcatagcatagcatccttgagcactaattgtctttacatcggc 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15702 caatgcagtaatacacgtcatagcatagcatccttgagcactaattgtctttacatcggc 15643
Query: 61 ktcaacgccggcaccaccactgckatcgcttccagccacgggcaacacacctggcaattt 120
|||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 15642 ttcaacgccggcaccaccactgctatcgcttccagccacggtcaacacacctggcaattt 15583
Query: 121 cctctcactccaatgagtgcccagakacaaaggkgaactaakctgakactcgaattcttt 180
||||||||||||||||||||||||| ||||||| ||||||| |||| |||||||||||||
Sbjct: 15582 cctctcactccaatgagtgcccagatacaaaggtgaactaatctgatactcgaattcttt 15523
Query: 181 cataaagtacgcgckggatackgkatgtktgtacttgctgatgcbaakcaaagakacaac 240
|||||||||||||| |||||| | |||| ||||||||||||||| || |||||| |||||
Sbjct: 15522 cataaagtacgcgctggatactgtatgtttgtacttgctgatgctaatcaaagatacaac 15463
Query: 241 atgcaatggkttaggkaacaagtatatkatcaccttcatatggckatctttttatatatg 300
||||||||| ||||| ||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 15462 atgcaatggtttaggtaacaagtatattatcaccttcatatggctatctttttatatatg 15403
Query: 301 aacttcgattgcggktccaattckaacagtktcccacttgagcgaggkcagckgatgaca 360
|||||||||||||| |||||||| |||||| |||||||||||||||| |||| |||||||
Sbjct: 15402 aacttcgattgcggttccaattctaacagtttcccacttgagcgaggtcagctgatgaca 15343
Query: 361 cattttacagckctaaacagtgccataackaacagtgaggactgakaaakggggktccag 420
||||||||||| ||||||||||||||||| |||||| |||||||| ||| ||| |||||
Sbjct: 15342 cattttacagctctaaacagtgccataactaacagttaggactgataaatgggtttccag 15283
Query: 421 agtgtackaacagakgtctggkggaagkragtgaaagaagcacttgkgaggacagagt-c 479
||||||| |||||| |||||| ||||| ||| ||||||||||||| |||||||||| |
Sbjct: 15282 agtgtactaacagatgtctggtggaagtaagttaaagaagcacttgttaggacagagtcc 15223
Query: 480 ttgggcgctatcctttggktccgatttccctgtgatataakgaacatttcactgacgcgc 539
|||||| ||||||||||| |||||||||||||| |||||| |||||||||||||||||||
Sbjct: 15222 ttgggctctatcctttggttccgatttccctgttatataatgaacatttcactgacgcgc 15163
Query: 540 gacagagttgakagatcacgtgatacatactgacatgaaggaatagaataccacagaaag 599
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15162 gacagatttgatagatcacgtgatacatactgacatgaaggaatagaataccacagaaag 15103
Query: 600 ctgtcagattccagtaaatcatgaaccatatcgcgcatggtgttgacttgctcaattaaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15102 ctgtcagattccagtaaatcatgaaccatatcgcgcatggtgttgacttgctcaattaaa 15043
Query: 660 ggtgtcctggcatgtatgaagtt 682
|||||||||||||||||||||||
Sbjct: 15042 ggtgtcctggcatgtatgaagtt 15020
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.43 0.718 1.35
Gapped
Lambda K H
1.43 0.718 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2261
Number of Sequences: 1807
Number of extensions: 2261
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 682
length of database: 10,358,551
effective HSP length: 16
effective length of query: 666
effective length of database: 10,329,639
effective search space: 6879539574
effective search space used: 6879539574
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.8 bits)
S1: 11 (23.1 bits)
S2: 48 (99.2 bits)